The whole chloroplast genome of Clintonia udensis, an import Chinese medicinal herb, was determined by Illumina sequencing data in this study.The cp Ball - Bag - Personal genome is 153,160 bp in length, with a large single-copy region (LSC) of 83,901 bp, a small single-copy region (SSC) of 17,241 bp and a pair of inverted repeat regions (IRs) of 26,009 bp.It contains 132 genes, including 83 protein-coding genes, 36 tRNA genes, 8 rRNA genes, and 5 pseudogenes.The overall GC content was 37.3%, while the corresponding values in the LSC, SSC and IR region are 35.
1, 31.0, Cables and 42.8%, respectively.Phylogenetic analysis indicated that Clintonia udensis was related to Lilioideae species in Liliaceae.